Recombinant:Article Title: Viral targeting of glioblastoma stem cells with patient-specific genetic and post-translational p53 deregulations.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Recombinant DNA Plasmid: pC53-SN3 A gift from B Vogelstein (Johns Hopkins University School of Medicine) via J Paramio (CIEMAT) Baker et al. (1990) Plasmid: pCMV-HA-E4orf6 A gift from S Weger (Charité–University) Winter et al. (2012) Plasmid: pMVMi A gift from P Tattersall (Yale University) Gardiner and Tattersall (1988) Plasmid: pMM984 (MVMp) A gift from P Tattersall (Yale University) Merchlinsky et al. (1983) Software and algorithms MetAligna 12.0 DNAStar Lasergene https://www.dnastar.com/software/ lasergene/ BioEdit Sequence alignment editor (v7.0.9.0) N/A https://bioedit.software.informer.com/ ImageJ (plugin 3D projection) Schneider et al. (2012) https://imagej.nih.gov/ij/ Integrative Genomics Viewer (IGV) Robinson et al. (2011) http://software.broadinstitute.org/ software/igv 4Peaks (v1.8) Nucleobytes https://nucleobytes.com/4peaks/ index.html FlowJo (v9.3; TreeStar) FlowJo, LLC https://flowjo.com/solutions/flowjo/ downloads Cell cycle platform Flowjo (v7.5) FlowJo, LLC N/A Sigmaplot (v12.5) Systat Software Inc. https://systatsoftware.com/sigmaplot FACSDiva (v6.1.2) BD Biosciencies https://www.bdbiosciences.com/en-in/ products/software/instrument-software/ bd-facsdiva-software ParaVision Bruker Ettlingen https://www.bruker.com/en.html TM4 Multiple Experiment Viewer (MeV) Wang et al. (2017) https://mev.tm4.org Expression Console Software Affymetrix https://www.thermofisher.com/us/en/ home/life-science/microarray-analysis/ microarray-analysis-instruments-softwareservices/microarray-analysis-software/ affymetrix-expression-console-software. html Robust Multi-Array Average (RMA) Irizarry et al. (2003) N/A ..
Plasmid Preparation:Article Title: Viral targeting of glioblastoma stem cells with patient-specific genetic and post-translational p53 deregulations.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Recombinant DNA Plasmid: pC53-SN3 A gift from B Vogelstein (Johns Hopkins University School of Medicine) via J Paramio (CIEMAT) Baker et al. (1990) Plasmid: pCMV-HA-E4orf6 A gift from S Weger (Charité–University) Winter et al. (2012) Plasmid: pMVMi A gift from P Tattersall (Yale University) Gardiner and Tattersall (1988) Plasmid: pMM984 (MVMp) A gift from P Tattersall (Yale University) Merchlinsky et al. (1983) Software and algorithms MetAligna 12.0 DNAStar Lasergene https://www.dnastar.com/software/ lasergene/ BioEdit Sequence alignment editor (v7.0.9.0) N/A https://bioedit.software.informer.com/ ImageJ (plugin 3D projection) Schneider et al. (2012) https://imagej.nih.gov/ij/ Integrative Genomics Viewer (IGV) Robinson et al. (2011) http://software.broadinstitute.org/ software/igv 4Peaks (v1.8) Nucleobytes https://nucleobytes.com/4peaks/ index.html FlowJo (v9.3; TreeStar) FlowJo, LLC https://flowjo.com/solutions/flowjo/ downloads Cell cycle platform Flowjo (v7.5) FlowJo, LLC N/A Sigmaplot (v12.5) Systat Software Inc. https://systatsoftware.com/sigmaplot FACSDiva (v6.1.2) BD Biosciencies https://www.bdbiosciences.com/en-in/ products/software/instrument-software/ bd-facsdiva-software ParaVision Bruker Ettlingen https://www.bruker.com/en.html TM4 Multiple Experiment Viewer (MeV) Wang et al. (2017) https://mev.tm4.org Expression Console Software Affymetrix https://www.thermofisher.com/us/en/ home/life-science/microarray-analysis/ microarray-analysis-instruments-softwareservices/microarray-analysis-software/ affymetrix-expression-console-software. html Robust Multi-Array Average (RMA) Irizarry et al. (2003) N/A ..
Software:Article Title: Viral targeting of glioblastoma stem cells with patient-specific genetic and post-translational p53 deregulations.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Recombinant DNA Plasmid: pC53-SN3 A gift from B Vogelstein (Johns Hopkins University School of Medicine) via J Paramio (CIEMAT) Baker et al. (1990) Plasmid: pCMV-HA-E4orf6 A gift from S Weger (Charité–University) Winter et al. (2012) Plasmid: pMVMi A gift from P Tattersall (Yale University) Gardiner and Tattersall (1988) Plasmid: pMM984 (MVMp) A gift from P Tattersall (Yale University) Merchlinsky et al. (1983) Software and algorithms MetAligna 12.0 DNAStar Lasergene https://www.dnastar.com/software/ lasergene/ BioEdit Sequence alignment editor (v7.0.9.0) N/A https://bioedit.software.informer.com/ ImageJ (plugin 3D projection) Schneider et al. (2012) https://imagej.nih.gov/ij/ Integrative Genomics Viewer (IGV) Robinson et al. (2011) http://software.broadinstitute.org/ software/igv 4Peaks (v1.8) Nucleobytes https://nucleobytes.com/4peaks/ index.html FlowJo (v9.3; TreeStar) FlowJo, LLC https://flowjo.com/solutions/flowjo/ downloads Cell cycle platform Flowjo (v7.5) FlowJo, LLC N/A Sigmaplot (v12.5) Systat Software Inc. https://systatsoftware.com/sigmaplot FACSDiva (v6.1.2) BD Biosciencies https://www.bdbiosciences.com/en-in/ products/software/instrument-software/ bd-facsdiva-software ParaVision Bruker Ettlingen https://www.bruker.com/en.html TM4 Multiple Experiment Viewer (MeV) Wang et al. (2017) https://mev.tm4.org Expression Console Software Affymetrix https://www.thermofisher.com/us/en/ home/life-science/microarray-analysis/ microarray-analysis-instruments-softwareservices/microarray-analysis-software/ affymetrix-expression-console-software. html Robust Multi-Array Average (RMA) Irizarry et al. (2003) N/A ..
Sequencing:Article Title: Viral targeting of glioblastoma stem cells with patient-specific genetic and post-translational p53 deregulations.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Recombinant DNA Plasmid: pC53-SN3 A gift from B Vogelstein (Johns Hopkins University School of Medicine) via J Paramio (CIEMAT) Baker et al. (1990) Plasmid: pCMV-HA-E4orf6 A gift from S Weger (Charité–University) Winter et al. (2012) Plasmid: pMVMi A gift from P Tattersall (Yale University) Gardiner and Tattersall (1988) Plasmid: pMM984 (MVMp) A gift from P Tattersall (Yale University) Merchlinsky et al. (1983) Software and algorithms MetAligna 12.0 DNAStar Lasergene https://www.dnastar.com/software/ lasergene/ BioEdit Sequence alignment editor (v7.0.9.0) N/A https://bioedit.software.informer.com/ ImageJ (plugin 3D projection) Schneider et al. (2012) https://imagej.nih.gov/ij/ Integrative Genomics Viewer (IGV) Robinson et al. (2011) http://software.broadinstitute.org/ software/igv 4Peaks (v1.8) Nucleobytes https://nucleobytes.com/4peaks/ index.html FlowJo (v9.3; TreeStar) FlowJo, LLC https://flowjo.com/solutions/flowjo/ downloads Cell cycle platform Flowjo (v7.5) FlowJo, LLC N/A Sigmaplot (v12.5) Systat Software Inc. https://systatsoftware.com/sigmaplot FACSDiva (v6.1.2) BD Biosciencies https://www.bdbiosciences.com/en-in/ products/software/instrument-software/ bd-facsdiva-software ParaVision Bruker Ettlingen https://www.bruker.com/en.html TM4 Multiple Experiment Viewer (MeV) Wang et al. (2017) https://mev.tm4.org Expression Console Software Affymetrix https://www.thermofisher.com/us/en/ home/life-science/microarray-analysis/ microarray-analysis-instruments-softwareservices/microarray-analysis-software/ affymetrix-expression-console-software. html Robust Multi-Array Average (RMA) Irizarry et al. (2003) N/A ..
Expressing:Article Title: Viral targeting of glioblastoma stem cells with patient-specific genetic and post-translational p53 deregulations.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Recombinant DNA Plasmid: pC53-SN3 A gift from B Vogelstein (Johns Hopkins University School of Medicine) via J Paramio (CIEMAT) Baker et al. (1990) Plasmid: pCMV-HA-E4orf6 A gift from S Weger (Charité–University) Winter et al. (2012) Plasmid: pMVMi A gift from P Tattersall (Yale University) Gardiner and Tattersall (1988) Plasmid: pMM984 (MVMp) A gift from P Tattersall (Yale University) Merchlinsky et al. (1983) Software and algorithms MetAligna 12.0 DNAStar Lasergene https://www.dnastar.com/software/ lasergene/ BioEdit Sequence alignment editor (v7.0.9.0) N/A https://bioedit.software.informer.com/ ImageJ (plugin 3D projection) Schneider et al. (2012) https://imagej.nih.gov/ij/ Integrative Genomics Viewer (IGV) Robinson et al. (2011) http://software.broadinstitute.org/ software/igv 4Peaks (v1.8) Nucleobytes https://nucleobytes.com/4peaks/ index.html FlowJo (v9.3; TreeStar) FlowJo, LLC https://flowjo.com/solutions/flowjo/ downloads Cell cycle platform Flowjo (v7.5) FlowJo, LLC N/A Sigmaplot (v12.5) Systat Software Inc. https://systatsoftware.com/sigmaplot FACSDiva (v6.1.2) BD Biosciencies https://www.bdbiosciences.com/en-in/ products/software/instrument-software/ bd-facsdiva-software ParaVision Bruker Ettlingen https://www.bruker.com/en.html TM4 Multiple Experiment Viewer (MeV) Wang et al. (2017) https://mev.tm4.org Expression Console Software Affymetrix https://www.thermofisher.com/us/en/ home/life-science/microarray-analysis/ microarray-analysis-instruments-softwareservices/microarray-analysis-software/ affymetrix-expression-console-software. html Robust Multi-Array Average (RMA) Irizarry et al. (2003) N/A ..
Microarray:Article Title: Viral targeting of glioblastoma stem cells with patient-specific genetic and post-translational p53 deregulations.
Article Snippet: .. REAGENT or RESOURCE SOURCE IDENTIFIER Recombinant DNA Plasmid: pC53-SN3 A gift from B Vogelstein (Johns Hopkins University School of Medicine) via J Paramio (CIEMAT) Baker et al. (1990) Plasmid: pCMV-HA-E4orf6 A gift from S Weger (Charité–University) Winter et al. (2012) Plasmid: pMVMi A gift from P Tattersall (Yale University) Gardiner and Tattersall (1988) Plasmid: pMM984 (MVMp) A gift from P Tattersall (Yale University) Merchlinsky et al. (1983) Software and algorithms MetAligna 12.0 DNAStar Lasergene https://www.dnastar.com/software/ lasergene/ BioEdit Sequence alignment editor (v7.0.9.0) N/A https://bioedit.software.informer.com/ ImageJ (plugin 3D projection) Schneider et al. (2012) https://imagej.nih.gov/ij/ Integrative Genomics Viewer (IGV) Robinson et al. (2011) http://software.broadinstitute.org/ software/igv 4Peaks (v1.8) Nucleobytes https://nucleobytes.com/4peaks/ index.html FlowJo (v9.3; TreeStar) FlowJo, LLC https://flowjo.com/solutions/flowjo/ downloads Cell cycle platform Flowjo (v7.5) FlowJo, LLC N/A Sigmaplot (v12.5) Systat Software Inc. https://systatsoftware.com/sigmaplot FACSDiva (v6.1.2) BD Biosciencies https://www.bdbiosciences.com/en-in/ products/software/instrument-software/ bd-facsdiva-software ParaVision Bruker Ettlingen https://www.bruker.com/en.html TM4 Multiple Experiment Viewer (MeV) Wang et al. (2017) https://mev.tm4.org Expression Console Software Affymetrix https://www.thermofisher.com/us/en/ home/life-science/microarray-analysis/ microarray-analysis-instruments-softwareservices/microarray-analysis-software/ affymetrix-expression-console-software. html Robust Multi-Array Average (RMA) Irizarry et al. (2003) N/A ..
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